rMAPS

rMAPS is a computational motif enrichment analysis tool for RNA-binding proteins using RNA-seq and CLIP-seq data.

rMAPS in Action

• Method of Yee et al., RNA 2019 doi: 10.1261/rna.069237.118
• Fig. 5E of Pillman et al., EMBO J 2018 doi: 10.15252/embj.201899016
• Fig. 6 of Cesana et al., Cell Stem Cell 2018 doi: 10.1016/j.stem.2018.03.012
• Fig. S6A and B of Wamsley et al., Neuron 2018 doi: 10.1016/j.neuron.2018.09.026
• Fig. S3 C-D of Juan-Mateu et al., Diabetes 2017 doi: 10.2337/db17-0736
• Fig. 5B of Melikishvili et al., Cell Discovery 2017 doi: 10.1038/celldisc.2017.43
• Fig. 3M of Liu et al., Nature 2017 doi: 10.1038/nature24454
• Cited by Lin et al., Human Molecular Genetics 2016 doi: 10.1093/hmg/ddw187
• Fig. 5 of Fiume et al., Int. J. Mol. Sci. 2016 doi: 10.3390/ijms17111848
• Fig. 6B of Yang et al., MCB 2016 doi: 10.1128/MCB.00019-16
• Fig. 3D of Cieply et al., Cell Reports 2016 doi: 10.1016/j.celrep.2016.03.025
• Fig. 1C-D of Xinjun et al., NAR 2016 doi: 10.1093/nar/gkw088
• Fig. 5C of Bebee et al., eLife 2015 doi: 10.7554/eLife.08954

Citation

Jae Y. Hwang, Sungbo Jung, Tae L. Kook, Eric C. Rouchka, Jinwoong Bok, Juw Won Park, rMAPS2: an update of the RNA map analysis and plotting server for alternative splicing regulation, Nucleic Acids Research, 2020, , doi: 10.1093/nar/gkaa237

Juw Won Park, Sungbo Jung, Eric C. Rouchka, Yu-Ting Tseng, Yi Xing, rMAPS: RNA Map Analysis and Plotting Server for Alternative Exon Regulation. , Nucleic Acids Research 2016 doi: 10.1093/nar/gkw410